Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | CPT03_RS10315 | Not Available | Negative | 2497666 - 2498628 | 34749.2 |
| acyl-coa carboxylase subunit beta | CPT03_RS10320 | Not Available | Negative | 2498735 - 2500363 | 59042.2 |
| beta-ketoacyl-acp synthase ii | CPT03_RS10325 | Not Available | Negative | 2500583 - 2501839 | 43899.2 |
| muts-related protein | CPT03_RS10330 | Not Available | Negative | 2501938 - 2503275 | 50862.2 |
| hypothetical protein | CPT03_RS10335 | Not Available | Positive | 2504130 - 2504588 | 17636.2 |
| colicin immunity domain-containing protein | CPT03_RS10340 | Not Available | Positive | 2504581 - 2504784 | 7994.81 |
| alpha-l-fucosidase | CPT03_RS10345 | Not Available | Negative | 2505014 - 2506366 | 51596.3 |
| abc transporter permease | CPT03_RS10350 | Not Available | Negative | 2506497 - 2508869 | 86945.5 |
| hypothetical protein | CPT03_RS23370 | Not Available | Negative | 2509411 - 2509533 | 4434.4 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | CPT03_RS10365 | Not Available | Negative | 2509978 - 2511081 | 42823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

