Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS10265 | Not Available | Negative | 2486649 - 2487077 | 16504.6 |
| dicarboxylate/amino acid:cation symporter | CPT03_RS10270 | Not Available | Negative | 2487165 - 2488592 | 52008.4 |
| rna polymerase sigma factor | CPT03_RS10275 | Not Available | Positive | 2488722 - 2489219 | 19579.3 |
| hypothetical protein | CPT03_RS10280 | Not Available | Positive | 2489206 - 2489805 | 23432.9 |
| nuclear transport factor 2 family protein | CPT03_RS10285 | Not Available | Negative | 2489946 - 2490380 | 16455.9 |
| helix-turn-helix transcriptional regulator | CPT03_RS10290 | Not Available | Negative | 2490444 - 2491298 | 32683.8 |
| two-component regulator propeller domain-containing protein | CPT03_RS10295 | Not Available | Positive | 2491466 - 2494351 | 108783.0 |
| response regulator | CPT03_RS10300 | Not Available | Positive | 2494344 - 2494976 | 23314.4 |
| hypothetical protein | CPT03_RS10305 | Not Available | Negative | 2494978 - 2495589 | 22584.8 |
| beta-n-acetylhexosaminidase | CPT03_RS10310 | Not Available | Negative | 2495642 - 2497549 | 70658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

