Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide adenylyltransferase | CPT03_RS10215 | Not Available | Negative | 2474112 - 2475422 | 48987.5 |
| abc transporter atp-binding protein | CPT03_RS10220 | Not Available | Positive | 2475550 - 2477259 | 64215.7 |
| mechanosensitive ion channel family protein | CPT03_RS10225 | Not Available | Negative | 2477256 - 2478176 | 34875.3 |
| hypothetical protein | CPT03_RS10230 | Not Available | Positive | 2478364 - 2480988 | 98708.4 |
| ribonuclease r | CPT03_RS10235 | Not Available | Positive | 2481044 - 2483176 | 80854.8 |
| polyprenyl synthetase family protein | CPT03_RS10240 | Not Available | Positive | 2483194 - 2484162 | 36239.9 |
| response regulator | CPT03_RS10245 | Not Available | Negative | 2484159 - 2485121 | 36535.2 |
| helix-turn-helix domain-containing protein | CPT03_RS10250 | Not Available | Positive | 2485332 - 2485694 | 13888.7 |
| 50s ribosomal protein l27 | CPT03_RS10255 | Not Available | Negative | 2485779 - 2486198 | 14567.6 |
| 50s ribosomal protein l21 | CPT03_RS10260 | Not Available | Negative | 2486256 - 2486567 | 11365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

