Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii polyketide synthase | CPT03_RS10165 | Not Available | Positive | 2465858 - 2466910 | 38874.4 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | CPT03_RS10170 | Not Available | Positive | 2466950 - 2467396 | 16415.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CPT03_RS10175 | Not Available | Positive | 2467389 - 2468663 | 44636.1 |
| phosphopantetheine-binding protein | CPT03_RS10180 | Not Available | Positive | 2468666 - 2468920 | 9469.28 |
| 4'-phosphopantetheinyl transferase superfamily protein | CPT03_RS10185 | Not Available | Positive | 2468917 - 2469381 | 17691.2 |
| exopolyphosphatase | CPT03_RS10190 | Not Available | Negative | 2469376 - 2470254 | 32911.9 |
| polyphosphate kinase 1 | CPT03_RS10195 | Not Available | Negative | 2470259 - 2472313 | 79593.8 |
| hypothetical protein | CPT03_RS10200 | Not Available | Negative | 2472426 - 2473007 | 20500.5 |
| yajq family cyclic di-gmp-binding protein | CPT03_RS10205 | Not Available | Positive | 2473171 - 2473662 | 18407.2 |
| gnat family n-acetyltransferase | CPT03_RS10210 | Not Available | Positive | 2473662 - 2474102 | 17022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

