Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5013 domain-containing protein | CPT03_RS10015 | Not Available | Negative | 2426694 - 2427803 | 40690.9 |
| duf1735 domain-containing protein | CPT03_RS10020 | Not Available | Negative | 2427878 - 2429326 | 51609.4 |
| duf4983 domain-containing protein | CPT03_RS10025 | Not Available | Negative | 2429395 - 2431185 | 65811.9 |
| duf5008 domain-containing protein | CPT03_RS10030 | Not Available | Negative | 2431240 - 2432847 | 58184.5 |
| fasciclin domain-containing protein | CPT03_RS10035 | Not Available | Negative | 2432894 - 2433670 | 29075.8 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10040 | Not Available | Negative | 2433689 - 2435311 | 61310.7 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS10045 | Not Available | Negative | 2435336 - 2438509 | 117231.0 |
| duf5007 domain-containing protein | CPT03_RS10050 | Not Available | Negative | 2438536 - 2439639 | 41521.4 |
| hypothetical protein | CPT03_RS10055 | Not Available | Negative | 2439672 - 2440871 | 45563.2 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10060 | Not Available | Negative | 2440888 - 2442429 | 58601.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

