Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS09965 | Not Available | Negative | 2415687 - 2416088 | 15535.2 |
| hypothetical protein | CPT03_RS09970 | Not Available | Negative | 2416111 - 2416338 | 8560.39 |
| alpha-galactosidase | CPT03_RS09975 | Not Available | Negative | 2416481 - 2418679 | 83120.1 |
| beta-n-acetylhexosaminidase | CPT03_RS09980 | Not Available | Negative | 2418681 - 2420516 | 69239.5 |
| sterol desaturase family protein | CPT03_RS09985 | Not Available | Negative | 2420666 - 2421268 | 23740.0 |
| bama/tama family outer membrane protein | CPT03_RS09990 | Not Available | Negative | 2421371 - 2423905 | 96190.7 |
| ring-cleaving dioxygenase | CPT03_RS09995 | Not Available | Positive | 2424030 - 2424965 | 35131.5 |
| alpha/beta hydrolase | CPT03_RS10000 | Not Available | Positive | 2424967 - 2425596 | 22826.4 |
| pirin family protein | CPT03_RS10005 | Not Available | Positive | 2425619 - 2426335 | 27655.7 |
| hypothetical protein | CPT03_RS10010 | Not Available | Positive | 2426341 - 2426640 | 10882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

