Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | CPT03_RS00060 | Not Available | Positive | 14308 - 15342 | 36236.9 |
| hypothetical protein | CPT03_RS00065 | Not Available | Positive | 15415 - 15996 | 21755.5 |
| ribonuclease h-like ykuk family protein | CPT03_RS00070 | Not Available | Negative | 15998 - 16471 | 17823.8 |
| hypothetical protein | CPT03_RS00075 | Not Available | Positive | 16742 - 16960 | 8834.94 |
| dead/deah box helicase | CPT03_RS00080 | Not Available | Positive | 16987 - 18294 | 48682.4 |
| duf1456 family protein | CPT03_RS00085 | Not Available | Positive | 18318 - 18545 | 8650.59 |
| rok family protein | CPT03_RS00090 | Not Available | Positive | 18674 - 19546 | 31811.1 |
| alpha/beta hydrolase | CPT03_RS00095 | Not Available | Positive | 19550 - 20368 | 30945.9 |
| duf6266 family protein | CPT03_RS00100 | Not Available | Negative | 20411 - 21040 | 23419.8 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS00105 | Not Available | Positive | 21421 - 22341 | 34203.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

