Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease meti | CPT03_RS09865 | Not Available | Negative | 2391784 - 2392440 | 23381.5 |
| methionine abc transporter atp-binding protein metn | CPT03_RS09870 | Not Available | Negative | 2392433 - 2393464 | 37737.9 |
| nad(p)/fad-dependent oxidoreductase | CPT03_RS09875 | Not Available | Negative | 2393577 - 2394485 | 33087.5 |
| hypothetical protein | CPT03_RS09880 | Not Available | Negative | 2394608 - 2395627 | 39230.9 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | CPT03_RS09885 | Not Available | Positive | 2395782 - 2396693 | 33720.7 |
| mfs transporter | CPT03_RS09890 | Not Available | Negative | 2396682 - 2397965 | 46537.9 |
| hypothetical protein | CPT03_RS09895 | Not Available | Negative | 2397978 - 2398202 | 8645.49 |
| tetr/acrr family transcriptional regulator | CPT03_RS09900 | Not Available | Negative | 2398210 - 2398842 | 24460.1 |
| duf4142 domain-containing protein | CPT03_RS09905 | Not Available | Positive | 2399022 - 2399594 | 21306.7 |
| glycoside hydrolase family 105 protein | CPT03_RS09910 | Not Available | Negative | 2399623 - 2400768 | 43462.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

