Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS09765 | Not Available | Positive | 2364236 - 2364898 | 24549.2 |
| sensor histidine kinase | CPT03_RS09770 | Not Available | Positive | 2364982 - 2365671 | 25787.0 |
| response regulator transcription factor | CPT03_RS09775 | Not Available | Positive | 2365696 - 2366349 | 24591.1 |
| acyltransferase family protein | CPT03_RS09780 | Not Available | Negative | 2366367 - 2367473 | 41746.1 |
| duf1801 domain-containing protein | CPT03_RS09785 | Not Available | Positive | 2367590 - 2368015 | 15933.3 |
| hypothetical protein | CPT03_RS09790 | Not Available | Positive | 2368089 - 2368430 | 13114.5 |
| alkaline phosphatase family protein | CPT03_RS09795 | Not Available | Positive | 2368707 - 2370053 | 50084.1 |
| cytochrome-c peroxidase | CPT03_RS09800 | Not Available | Positive | 2370086 - 2371930 | 68910.2 |
| patatin-like phospholipase family protein | CPT03_RS09805 | Not Available | Negative | 2371940 - 2375245 | 124729.0 |
| duf1801 domain-containing protein | CPT03_RS09810 | Not Available | Positive | 2375496 - 2375885 | 15172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

