Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pasta domain-containing protein | CPT03_RS09665 | Not Available | Positive | 2342291 - 2343061 | 28059.9 |
| endolytic transglycosylase mltg | CPT03_RS09670 | Not Available | Positive | 2343081 - 2344139 | 40215.6 |
| acyl-coa thioesterase | CPT03_RS09675 | Not Available | Positive | 2344139 - 2344546 | 15605.0 |
| yihy/virulence factor brkb family protein | CPT03_RS09680 | Not Available | Positive | 2344556 - 2345536 | 37148.6 |
| Trna-ser | Not Available | Not Available | Positive | 2345632 - 2345716 | Not Available |
| na+/h+ antiporter | CPT03_RS09690 | Not Available | Negative | 2345757 - 2347340 | 58426.9 |
| Trna-ser | Not Available | Not Available | Positive | 2347560 - 2347644 | Not Available |
| hypothetical protein | CPT03_RS09700 | Not Available | Negative | 2348088 - 2348633 | 20995.0 |
| hypothetical protein | CPT03_RS09705 | Not Available | Negative | 2348642 - 2350069 | 52470.1 |
| glycosyltransferase family 39 protein | CPT03_RS09710 | Not Available | Positive | 2350196 - 2351737 | 59488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

