Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | CPT03_RS09570 | Not Available | Negative | 2322481 - 2323392 | 34578.5 |
| stas domain-containing protein | CPT03_RS09575 | Not Available | Negative | 2323392 - 2323778 | 14374.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CPT03_RS09580 | Not Available | Negative | 2323856 - 2324809 | 35847.7 |
| phoh family protein | CPT03_RS09585 | Not Available | Negative | 2324938 - 2325903 | 35606.4 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | CPT03_RS09590 | Not Available | Positive | 2326006 - 2326785 | 29307.6 |
| hypothetical protein | CPT03_RS09595 | Not Available | Positive | 2326845 - 2327357 | 19755.0 |
| hypothetical protein | CPT03_RS22905 | Not Available | Positive | 2327357 - 2327503 | 5584.1 |
| duf1015 domain-containing protein | CPT03_RS09600 | Not Available | Negative | 2327496 - 2328740 | 47565.1 |
| d-2-hydroxyacid dehydrogenase | CPT03_RS09605 | Not Available | Negative | 2328796 - 2329746 | 33725.8 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CPT03_RS09610 | Not Available | Negative | 2329758 - 2330825 | 39127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

