Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-sulfuration enzyme family protein | CPT03_RS09520 | Not Available | Positive | 2309093 - 2310211 | 40520.8 |
| hypothetical protein | CPT03_RS09525 | Not Available | Positive | 2310724 - 2312027 | 47129.8 |
| homoserine o-acetyltransferase family protein | CPT03_RS09530 | Not Available | Positive | 2312049 - 2313107 | 39098.7 |
| homoserine dehydrogenase | CPT03_RS09535 | Not Available | Positive | 2313115 - 2314356 | 46877.1 |
| dihydrolipoamide acetyltransferase family protein | CPT03_RS09540 | Not Available | Negative | 2314422 - 2315744 | 48013.9 |
| competence/damage-inducible protein a | CPT03_RS09545 | Not Available | Negative | 2315795 - 2317042 | 45596.4 |
| putative lps assembly protein lptd | CPT03_RS09550 | Not Available | Negative | 2317054 - 2319717 | 100379.0 |
| n-acetylmuramoyl-l-alanine amidase family protein | CPT03_RS09555 | Not Available | Positive | 2319774 - 2320652 | 32632.2 |
| n-acetylmuramoyl-l-alanine amidase family protein | CPT03_RS09560 | Not Available | Positive | 2320655 - 2321500 | 31684.1 |
| mlad family protein | CPT03_RS09565 | Not Available | Positive | 2321527 - 2322477 | 33847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

