Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminofutalosine synthase mqne | CPT03_RS09470 | Not Available | Negative | 2293609 - 2294802 | 46061.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS09475 | Not Available | Negative | 2294975 - 2296552 | 58586.6 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS09480 | Not Available | Negative | 2296565 - 2299723 | 113608.0 |
| rna polymerase sigma-70 factor | CPT03_RS09485 | Not Available | Positive | 2299912 - 2300583 | 26278.9 |
| fecr family protein | CPT03_RS09490 | Not Available | Positive | 2300626 - 2301666 | 40172.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS09495 | Not Available | Positive | 2301753 - 2304815 | 112250.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS09500 | Not Available | Positive | 2304825 - 2306420 | 59309.2 |
| mfs transporter | CPT03_RS09505 | Not Available | Negative | 2306426 - 2307658 | 44461.5 |
| fadr/gntr family transcriptional regulator | CPT03_RS09510 | Not Available | Negative | 2307698 - 2308363 | 25060.2 |
| lipocalin family protein | CPT03_RS09515 | Not Available | Negative | 2308487 - 2308975 | 17334.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

