Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | CPT03_RS09370 | Not Available | Negative | 2268833 - 2270725 | 71539.3 |
| amidohydrolase family protein | CPT03_RS09375 | Not Available | Positive | 2270799 - 2274038 | 119932.0 |
| serpin family protein | CPT03_RS09380 | Not Available | Negative | 2274052 - 2275299 | 46116.5 |
| leucyl/phenylalanyl-trna--protein transferase | CPT03_RS09385 | Not Available | Positive | 2275589 - 2276371 | 28841.0 |
| nad(p)/fad-dependent oxidoreductase | CPT03_RS09390 | Not Available | Negative | 2276389 - 2277621 | 45192.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CPT03_RS09395 | Not Available | Positive | 2277639 - 2278778 | 42536.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CPT03_RS09400 | Not Available | Positive | 2278778 - 2279260 | 16877.7 |
| yqge/algh family protein | CPT03_RS09405 | Not Available | Negative | 2279344 - 2279907 | 21044.9 |
| pyridoxamine 5'-phosphate oxidase | CPT03_RS09410 | Not Available | Positive | 2279955 - 2280605 | 24919.4 |
| 3-hydroxybutyryl-coa dehydrogenase | CPT03_RS09415 | Not Available | Positive | 2280616 - 2281506 | 32063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

