Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | CPT03_RS09175 | Not Available | Positive | 2223966 - 2224802 | 30188.9 |
| hypothetical protein | CPT03_RS09180 | Not Available | Negative | 2224885 - 2225295 | 15137.1 |
| hypothetical protein | CPT03_RS09185 | Not Available | Negative | 2225637 - 2225861 | 8531.09 |
| twin-arginine translocase tata/tate family subunit | CPT03_RS09190 | Not Available | Negative | 2226270 - 2226473 | 7140.86 |
| hypothetical protein | CPT03_RS22785 | Not Available | Positive | 2226579 - 2226716 | 5175.36 |
| helix-turn-helix domain-containing protein | CPT03_RS09195 | Not Available | Negative | 2226755 - 2227321 | 21511.1 |
| heavy-metal-associated domain-containing protein | CPT03_RS09200 | Not Available | Negative | 2227336 - 2227548 | 7843.39 |
| heavy metal translocating p-type atpase | CPT03_RS09205 | Not Available | Negative | 2227799 - 2230030 | 80146.0 |
| tonb-dependent receptor domain-containing protein | CPT03_RS09210 | Not Available | Negative | 2230134 - 2232554 | 89868.6 |
| duf6588 family protein | CPT03_RS09215 | Not Available | Positive | 2232866 - 2233921 | 38394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

