Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | CPT03_RS09075 | Not Available | Negative | 2202262 - 2202834 | 21687.1 |
| glycosyltransferase family 4 protein | CPT03_RS09080 | Not Available | Negative | 2202855 - 2203994 | 43527.7 |
| glycosyltransferase | CPT03_RS09085 | Not Available | Negative | 2204018 - 2205190 | 44815.9 |
| glycosyltransferase | CPT03_RS09090 | Not Available | Negative | 2205190 - 2206227 | 39741.1 |
| acyltransferase | CPT03_RS09095 | Not Available | Negative | 2206424 - 2207038 | 22476.7 |
| o-antigen ligase family protein | CPT03_RS09100 | Not Available | Negative | 2207134 - 2208648 | 56045.2 |
| gumc family protein | CPT03_RS09105 | Not Available | Negative | 2208659 - 2210797 | 79990.2 |
| o-antigen ligase family protein | CPT03_RS09110 | Not Available | Negative | 2211019 - 2212485 | 54307.4 |
| gumc family protein | CPT03_RS09115 | Not Available | Negative | 2212496 - 2214634 | 79962.2 |
| tolc family protein | CPT03_RS09120 | Not Available | Negative | 2214658 - 2215338 | 25744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

