Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase family protein | CPT03_RS09025 | Not Available | Positive | 2189048 - 2189743 | 26926.0 |
| glycosyltransferase family 2 protein | CPT03_RS09030 | Not Available | Negative | 2189752 - 2190918 | 44484.2 |
| glycosyltransferase family 2 protein | CPT03_RS09035 | Not Available | Negative | 2190925 - 2191836 | 34967.6 |
| hypothetical protein | CPT03_RS09040 | Not Available | Negative | 2191871 - 2193439 | 60338.9 |
| phosphoribosyltransferase | CPT03_RS09045 | Not Available | Negative | 2193533 - 2194441 | 34730.1 |
| lipopolysaccharide biosynthesis protein | CPT03_RS09050 | Not Available | Negative | 2194454 - 2195968 | 56127.7 |
| glycosyltransferase | CPT03_RS09055 | Not Available | Negative | 2196030 - 2197232 | 45815.0 |
| hypothetical protein | CPT03_RS09060 | Not Available | Positive | 2197752 - 2199179 | 51961.7 |
| lipopolysaccharide biosynthesis protein | CPT03_RS09065 | Not Available | Negative | 2199191 - 2200552 | 51260.2 |
| gmc oxidoreductase | CPT03_RS09070 | Not Available | Negative | 2200562 - 2202253 | 63460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

