Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bestrophin family protein | CPT03_RS08975 | Not Available | Negative | 2170805 - 2171665 | 32970.3 |
| kynureninase | CPT03_RS08980 | Not Available | Negative | 2171687 - 2172973 | 48564.2 |
| dna-3-methyladenine glycosylase | CPT03_RS08985 | Not Available | Negative | 2173062 - 2173667 | 22267.9 |
| gaf domain-containing protein | CPT03_RS08990 | Not Available | Negative | 2173660 - 2174136 | 17509.1 |
| s46 family peptidase | CPT03_RS08995 | Not Available | Positive | 2174451 - 2176619 | 81603.5 |
| hypothetical protein | CPT03_RS09000 | Not Available | Positive | 2176649 - 2176900 | 9643.54 |
| hypothetical protein | CPT03_RS09005 | Not Available | Positive | 2177225 - 2177791 | 20262.6 |
| hypothetical protein | CPT03_RS09010 | Not Available | Positive | 2178038 - 2178223 | 7159.55 |
| type i polyketide synthase | CPT03_RS09015 | Not Available | Positive | 2178464 - 2185057 | 243783.0 |
| non-ribosomal peptide synthetase | CPT03_RS09020 | Not Available | Positive | 2185069 - 2189034 | 149406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

