Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3667 domain-containing protein | CPT03_RS08925 | Not Available | Positive | 2160657 - 2161790 | 44559.7 |
| citrate synthase | CPT03_RS08930 | Not Available | Negative | 2161848 - 2163137 | 48402.2 |
| duf3347 domain-containing protein | CPT03_RS08935 | Not Available | Negative | 2163260 - 2163799 | 19489.2 |
| hypothetical protein | CPT03_RS08940 | Not Available | Negative | 2164103 - 2164606 | 17345.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CPT03_RS08945 | Not Available | Negative | 2164707 - 2165645 | 35962.6 |
| hypothetical protein | CPT03_RS08950 | Not Available | Negative | 2165645 - 2166463 | 31279.0 |
| hypothetical protein | CPT03_RS08955 | Not Available | Negative | 2166454 - 2166831 | 14491.7 |
| mbl fold metallo-hydrolase | CPT03_RS08960 | Not Available | Negative | 2166892 - 2167983 | 41390.6 |
| dna topoisomerase iii | CPT03_RS08965 | Not Available | Negative | 2168042 - 2169901 | 69531.6 |
| histone deacetylase | CPT03_RS08970 | Not Available | Negative | 2169904 - 2170803 | 33777.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

