Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | CPT03_RS08875 | Not Available | Positive | 2150520 - 2151485 | 34453.1 |
| mannose-1-phosphate guanylyltransferase | CPT03_RS08880 | Not Available | Positive | 2151505 - 2152596 | 40677.4 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | CPT03_RS08885 | Not Available | Negative | 2152668 - 2153435 | 27805.1 |
| replicative dna helicase | CPT03_RS08890 | Not Available | Positive | 2153642 - 2155216 | 58240.7 |
| chromate efflux transporter | CPT03_RS08895 | Not Available | Negative | 2155233 - 2156435 | 43978.3 |
| tetratricopeptide repeat protein | CPT03_RS08900 | Not Available | Negative | 2156447 - 2156782 | 12677.7 |
| electron transfer flavoprotein subunit beta/fixa family protein | CPT03_RS08905 | Not Available | Positive | 2156869 - 2157606 | 26577.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CPT03_RS08910 | Not Available | Positive | 2157652 - 2158623 | 33804.6 |
| bifunctional nuclease family protein | CPT03_RS08915 | Not Available | Positive | 2158674 - 2159288 | 22689.1 |
| nucleoside permease | CPT03_RS08920 | Not Available | Positive | 2159347 - 2160612 | 47320.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

