Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrilase family protein | CPT03_RS08825 | Not Available | Positive | 2138957 - 2139760 | 31078.2 |
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | CPT03_RS08830 | Not Available | Positive | 2139777 - 2140811 | 37040.7 |
| copper homeostasis protein cutc | CPT03_RS08835 | Not Available | Positive | 2140815 - 2141555 | 26486.2 |
| translation elongation factor 4 | CPT03_RS08840 | Not Available | Positive | 2141589 - 2143376 | 66655.9 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | CPT03_RS08845 | Not Available | Positive | 2143433 - 2144314 | 31789.9 |
| rieske (2fe-2s) protein | CPT03_RS08850 | Not Available | Negative | 2144343 - 2144672 | 12521.0 |
| 7-carboxy-7-deazaguanine synthase quee | CPT03_RS08855 | Not Available | Positive | 2144821 - 2145444 | 23599.3 |
| ompa family protein | CPT03_RS08860 | Not Available | Positive | 2145494 - 2147392 | 71195.6 |
| 3-deoxy-8-phosphooctulonate synthase | CPT03_RS08865 | Not Available | Negative | 2147410 - 2148225 | 29357.7 |
| dna helicase recq | CPT03_RS08870 | Not Available | Negative | 2148241 - 2150430 | 82375.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

