Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS08775 | Not Available | Positive | 2132401 - 2132580 | 6290.75 |
| yceh family protein | CPT03_RS08780 | Not Available | Negative | 2132569 - 2133222 | 24373.4 |
| l-glyceraldehyde 3-phosphate reductase | CPT03_RS08785 | Not Available | Negative | 2133229 - 2134224 | 37286.5 |
| histone h1 | CPT03_RS08790 | Not Available | Negative | 2134286 - 2134462 | 6529.84 |
| response regulator transcription factor | CPT03_RS08795 | Not Available | Positive | 2134624 - 2134995 | 13798.6 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | CPT03_RS08800 | Not Available | Positive | 2135074 - 2135538 | 16958.2 |
| res family nad+ phosphorylase | CPT03_RS08805 | Not Available | Positive | 2135541 - 2135990 | 17098.8 |
| grea/greb family elongation factor | CPT03_RS08810 | Not Available | Positive | 2136567 - 2136944 | 14254.2 |
| queuosine precursor transporter | CPT03_RS08815 | Not Available | Negative | 2136949 - 2137719 | 28542.7 |
| methionine aminotransferase | CPT03_RS08820 | Not Available | Positive | 2137787 - 2138932 | 42839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

