Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | CPT03_RS08680 | Not Available | Negative | 2115824 - 2116990 | 42124.6 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS08685 | Not Available | Negative | 2117000 - 2117896 | 33713.1 |
| thua domain-containing protein | CPT03_RS08690 | Not Available | Negative | 2117951 - 2118820 | 32378.9 |
| hypothetical protein | CPT03_RS08695 | Not Available | Positive | 2119040 - 2119939 | 34879.1 |
| group iii truncated hemoglobin | CPT03_RS08700 | Not Available | Negative | 2119994 - 2120380 | 14670.7 |
| hypothetical protein | CPT03_RS22950 | Not Available | Negative | 2120442 - 2120813 | 14096.8 |
| globin domain-containing protein | CPT03_RS08705 | Not Available | Negative | 2120819 - 2121652 | 30812.8 |
| rrf2 family transcriptional regulator | CPT03_RS08710 | Not Available | Negative | 2121699 - 2122136 | 15807.0 |
| gtp cyclohydrolase i fole | CPT03_RS08715 | Not Available | Negative | 2122203 - 2122904 | 26176.3 |
| plastocyanin/azurin family copper-binding protein | CPT03_RS08720 | Not Available | Negative | 2122995 - 2123315 | 12025.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

