Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CPT03_RS08585 | Not Available | Positive | 2090467 - 2091099 | 23944.0 |
| 7tm diverse intracellular signaling domain-containing protein | CPT03_RS08590 | Not Available | Positive | 2091077 - 2092855 | 68066.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS08595 | Not Available | Negative | 2092901 - 2094409 | 56230.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS08600 | Not Available | Negative | 2094421 - 2097489 | 113291.0 |
| lytr/algr family response regulator transcription factor | CPT03_RS08605 | Not Available | Negative | 2097820 - 2098542 | 27627.8 |
| sensor histidine kinase | CPT03_RS08610 | Not Available | Negative | 2098567 - 2099628 | 41123.7 |
| hypothetical protein | CPT03_RS08615 | Not Available | Positive | 2099816 - 2100268 | 16956.7 |
| subclass b3 metallo-beta-lactamase | CPT03_RS08620 | Not Available | Positive | 2100410 - 2101279 | 32197.8 |
| pqq-dependent sugar dehydrogenase | CPT03_RS08625 | Not Available | Negative | 2101287 - 2102486 | 44739.5 |
| m16 family metallopeptidase | CPT03_RS08630 | Not Available | Negative | 2102679 - 2105486 | 105382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

