Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS08430 | Not Available | Negative | 2055885 - 2056100 | 8362.57 |
| conjugative transposon protein trak | CPT03_RS08435 | Not Available | Negative | 2056103 - 2056720 | 23603.2 |
| ywfcy domain-containing protein | CPT03_RS08440 | Not Available | Negative | 2056724 - 2058001 | 47292.5 |
| relaxase/mobilization nuclease domain-containing protein | CPT03_RS08445 | Not Available | Negative | 2058015 - 2059283 | 48507.4 |
| plasmid mobilization relaxosome protein mobc | CPT03_RS08450 | Not Available | Negative | 2059268 - 2059678 | 16074.7 |
| helix-turn-helix domain-containing protein | CPT03_RS08455 | Not Available | Negative | 2059868 - 2060158 | 11156.5 |
| hypothetical protein | CPT03_RS08460 | Not Available | Positive | 2060341 - 2060895 | 21213.3 |
| hypothetical protein | CPT03_RS22945 | Not Available | Positive | 2060899 - 2062374 | 55917.5 |
| hypothetical protein | CPT03_RS08470 | Not Available | Positive | 2062416 - 2062796 | 14825.1 |
| hnh endonuclease | CPT03_RS08475 | Not Available | Positive | 2062802 - 2063698 | 34387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

