Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase epsc | CPT03_RS08275 | Not Available | Negative | 2016400 - 2017209 | 30190.6 |
| aaa domain-containing protein | CPT03_RS08280 | Not Available | Negative | 2017286 - 2019193 | 70372.4 |
| duf3037 domain-containing protein | CPT03_RS08285 | Not Available | Negative | 2019193 - 2019579 | 14510.7 |
| hipa family kinase | CPT03_RS08290 | Not Available | Negative | 2019557 - 2020354 | 29797.7 |
| beta-n-acetylhexosaminidase | CPT03_RS08295 | Not Available | Negative | 2020364 - 2022598 | 84255.8 |
| hypothetical protein | CPT03_RS08300 | Not Available | Negative | 2022841 - 2023308 | 17373.9 |
| enoyl-acp reductase fabv | CPT03_RS08305 | Not Available | Negative | 2023376 - 2024569 | 42976.2 |
| isopentenyl-diphosphate delta-isomerase | CPT03_RS08310 | Not Available | Negative | 2024598 - 2025152 | 21578.5 |
| family 78 glycoside hydrolase catalytic domain | CPT03_RS08315 | Not Available | Positive | 2025246 - 2027723 | 93183.8 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | CPT03_RS23365 | Not Available | Positive | 2027786 - 2028058 | 9741.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

