Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | CPT03_RS08225 | Not Available | Positive | 2000646 - 2001665 | 38215.3 |
| phosphotransferase enzyme family protein | CPT03_RS08230 | Not Available | Positive | 2001747 - 2002775 | 39556.0 |
| outer membrane beta-barrel protein | CPT03_RS08235 | Not Available | Negative | 2002789 - 2005449 | 97443.9 |
| alpha-galactosidase | CPT03_RS08240 | Not Available | Negative | 2005509 - 2007560 | 76459.0 |
| sgnh/gdsl hydrolase family protein | CPT03_RS08245 | Not Available | Negative | 2007569 - 2008768 | 43823.9 |
| alpha-l-fucosidase | CPT03_RS08250 | Not Available | Negative | 2008777 - 2010111 | 50276.8 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | CPT03_RS08255 | Not Available | Negative | 2010771 - 2012396 | 60132.5 |
| mfs transporter | CPT03_RS08260 | Not Available | Negative | 2012430 - 2013803 | 50592.5 |
| tagaturonate reductase | CPT03_RS08265 | Not Available | Negative | 2013840 - 2015336 | 55871.4 |
| cysteine synthase cysm | CPT03_RS08270 | Not Available | Negative | 2015477 - 2016349 | 31811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

