Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system outer membrane channel protein porv | CPT03_RS08075 | Not Available | Positive | 1968564 - 1969730 | 43330.2 |
| hypothetical protein | CPT03_RS08080 | Not Available | Positive | 1969798 - 1973076 | 106159.0 |
| hypothetical protein | CPT03_RS08085 | Not Available | Positive | 1973101 - 1973565 | 16804.1 |
| hd domain-containing protein | CPT03_RS08090 | Not Available | Negative | 1973847 - 1974698 | 32586.4 |
| gfo/idh/moca family protein | CPT03_RS08095 | Not Available | Negative | 1974766 - 1975755 | 37011.5 |
| hypothetical protein | CPT03_RS08100 | Not Available | Negative | 1975806 - 1976048 | 8946.58 |
| dna polymerase iv | CPT03_RS08105 | Not Available | Positive | 1976168 - 1977223 | 39418.5 |
| hypothetical protein | CPT03_RS08110 | Not Available | Positive | 1977325 - 1977903 | 19900.0 |
| hypothetical protein | CPT03_RS08115 | Not Available | Positive | 1978223 - 1978534 | 11268.7 |
| patatin-like phospholipase family protein | CPT03_RS08120 | Not Available | Negative | 1978924 - 1979979 | 39183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

