Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CPT03_RS08025 | Not Available | Negative | 1951905 - 1953146 | 45570.5 |
| kelch repeat-containing protein | CPT03_RS08030 | Not Available | Negative | 1953151 - 1954332 | 42316.5 |
| dihydrodipicolinate synthase family protein | CPT03_RS08035 | Not Available | Negative | 1954350 - 1955279 | 34292.4 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS08040 | Not Available | Negative | 1955350 - 1956927 | 59279.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS08045 | Not Available | Negative | 1956951 - 1960406 | 126426.0 |
| fadr/gntr family transcriptional regulator | CPT03_RS08050 | Not Available | Positive | 1960579 - 1961283 | 26886.1 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | CPT03_RS08055 | Not Available | Positive | 1961328 - 1963505 | 83465.7 |
| glycoside hydrolase family 15 protein | CPT03_RS08060 | Not Available | Negative | 1963515 - 1965299 | 69130.3 |
| abc transporter permease | CPT03_RS08065 | Not Available | Positive | 1965488 - 1967863 | 88711.0 |
| t9ss type a sorting domain-containing protein | CPT03_RS08070 | Not Available | Positive | 1968059 - 1968559 | 18128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

