Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/sugar symporter | CPT03_RS07975 | Not Available | Negative | 1932375 - 1934060 | 61208.6 |
| c-type cytochrome | CPT03_RS07980 | Not Available | Negative | 1934175 - 1936139 | 72495.3 |
| duf1080 domain-containing protein | CPT03_RS07985 | Not Available | Negative | 1936154 - 1937590 | 51959.5 |
| pqq-dependent sugar dehydrogenase | CPT03_RS07990 | Not Available | Positive | 1938221 - 1940944 | 98901.9 |
| pvc-type heme-binding cxxch protein | CPT03_RS07995 | Not Available | Positive | 1941168 - 1944266 | 113650.0 |
| hypothetical protein | CPT03_RS08000 | Not Available | Negative | 1944267 - 1945016 | 27771.1 |
| beta-n-acetylhexosaminidase | CPT03_RS08005 | Not Available | Negative | 1945060 - 1947021 | 74723.1 |
| age family epimerase/isomerase | CPT03_RS08010 | Not Available | Negative | 1947028 - 1948212 | 46052.7 |
| gdsl-type esterase/lipase family protein | CPT03_RS08015 | Not Available | Negative | 1948224 - 1950296 | 77731.7 |
| sialidase family protein | CPT03_RS08020 | Not Available | Negative | 1950299 - 1951873 | 57270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

