Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | CPT03_RS07925 | Not Available | Negative | 1920763 - 1921614 | 30881.1 |
| serine palmitoyltransferase | CPT03_RS07930 | Not Available | Positive | 1922372 - 1923577 | 43787.6 |
| hypothetical protein | CPT03_RS07935 | Not Available | Positive | 1923574 - 1924692 | 42362.2 |
| nad-dependent epimerase/dehydratase family protein | CPT03_RS07940 | Not Available | Positive | 1924689 - 1925678 | 36835.4 |
| exodeoxyribonuclease vii small subunit | CPT03_RS07945 | Not Available | Negative | 1925684 - 1925884 | 7608.99 |
| exodeoxyribonuclease vii large subunit | CPT03_RS07950 | Not Available | Negative | 1925862 - 1927253 | 52511.0 |
| s66 peptidase family protein | CPT03_RS07955 | Not Available | Negative | 1927228 - 1928268 | 37966.9 |
| pmoa family protein | CPT03_RS07960 | Not Available | Positive | 1928440 - 1929465 | 37826.8 |
| duf1080 domain-containing protein | CPT03_RS07965 | Not Available | Positive | 1929491 - 1930852 | 50786.5 |
| gfo/idh/moca family protein | CPT03_RS07970 | Not Available | Positive | 1930862 - 1932220 | 50782.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

