Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | CPT03_RS00765 | Not Available | Positive | 195639 - 196664 | 39118.4 |
| nad(p)-dependent alcohol dehydrogenase | CPT03_RS00770 | Not Available | Positive | 196831 - 197877 | 37687.2 |
| pkd domain-containing protein | CPT03_RS00775 | Not Available | Positive | 198144 - 203093 | 176436.0 |
| porp/sprf family type ix secretion system membrane protein | CPT03_RS00780 | Not Available | Positive | 203095 - 204123 | 37793.6 |
| smi1/knr4 family protein | CPT03_RS00785 | Not Available | Negative | 204234 - 204641 | 16114.8 |
| hypothetical protein | CPT03_RS00790 | Not Available | Negative | 204846 - 205103 | 10127.1 |
| hypothetical protein | CPT03_RS00800 | Not Available | Negative | 205828 - 206100 | 10750.1 |
| hypothetical protein | CPT03_RS00805 | Not Available | Negative | 206329 - 206514 | 7324.77 |
| eve domain-containing protein | CPT03_RS00810 | Not Available | Positive | 206600 - 207004 | 15494.4 |
| sodium:proton antiporter | CPT03_RS00815 | Not Available | Negative | 207001 - 208200 | 44369.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

