Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS07875 | Not Available | Negative | 1914049 - 1914789 | 26677.5 |
| crp/fnr family transcriptional regulator | CPT03_RS07880 | Not Available | Negative | 1914865 - 1915431 | 21586.0 |
| helix-turn-helix transcriptional regulator | CPT03_RS07885 | Not Available | Negative | 1915508 - 1916260 | 28959.7 |
| sdr family oxidoreductase | CPT03_RS07890 | Not Available | Negative | 1916501 - 1917247 | 26603.2 |
| hypothetical protein | CPT03_RS07895 | Not Available | Positive | 1917545 - 1917877 | 12306.9 |
| helix-turn-helix transcriptional regulator | CPT03_RS07900 | Not Available | Positive | 1918005 - 1918694 | 26942.4 |
| rida family protein | CPT03_RS07905 | Not Available | Positive | 1918776 - 1919168 | 14565.4 |
| ydei/ompd-associated family protein | CPT03_RS07910 | Not Available | Positive | 1919171 - 1919746 | 22113.4 |
| tyrosine-type recombinase/integrase | CPT03_RS07915 | Not Available | Negative | 1919784 - 1919984 | 7648.14 |
| rna recognition motif domain-containing protein | CPT03_RS07920 | Not Available | Negative | 1920285 - 1920587 | 11028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

