Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | CPT03_RS07775 | Not Available | Negative | 1887255 - 1888223 | 34821.5 |
| type ii 3-dehydroquinate dehydratase | CPT03_RS07780 | Not Available | Negative | 1888213 - 1888647 | 15912.1 |
| site-specific tyrosine recombinase xerd | CPT03_RS07785 | Not Available | Positive | 1888692 - 1889591 | 33922.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | CPT03_RS07790 | Not Available | Negative | 1889553 - 1890422 | 32714.6 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CPT03_RS07795 | Not Available | Positive | 1890471 - 1891526 | 39691.7 |
| dmt family transporter | CPT03_RS07800 | Not Available | Positive | 1891523 - 1892389 | 32782.7 |
| impact family protein | CPT03_RS07805 | Not Available | Positive | 1892379 - 1892993 | 22877.6 |
| nucleoside phosphorylase | CPT03_RS07810 | Not Available | Positive | 1893004 - 1893882 | 32349.9 |
| hypothetical protein | CPT03_RS07815 | Not Available | Positive | 1893965 - 1894285 | 11738.3 |
| gh92 family glycosyl hydrolase | CPT03_RS07820 | Not Available | Negative | 1894348 - 1896633 | 86268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

