Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | CPT03_RS07725 | Not Available | Positive | 1873849 - 1876446 | 97249.0 |
| tetratricopeptide repeat protein | CPT03_RS07730 | Not Available | Positive | 1876479 - 1877552 | 39954.8 |
| tetratricopeptide repeat protein | CPT03_RS07735 | Not Available | Positive | 1877620 - 1878768 | 42873.8 |
| fusc family protein | CPT03_RS07740 | Not Available | Positive | 1878925 - 1881102 | 83142.7 |
| biotin synthase biob | CPT03_RS07745 | Not Available | Negative | 1881177 - 1882187 | 37292.8 |
| magnesium transporter | CPT03_RS07750 | Not Available | Negative | 1882207 - 1883556 | 49789.7 |
| magnesium/cobalt transporter cora | CPT03_RS07755 | Not Available | Negative | 1883584 - 1884705 | 43105.4 |
| wbqc family protein | CPT03_RS07760 | Not Available | Negative | 1884707 - 1885318 | 24625.1 |
| lysophospholipid acyltransferase family protein | CPT03_RS07765 | Not Available | Positive | 1885357 - 1886241 | 34906.8 |
| glycosyltransferase family 2 protein | CPT03_RS07770 | Not Available | Positive | 1886242 - 1887258 | 38710.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

