Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase family protein | CPT03_RS07675 | Not Available | Positive | 1865073 - 1866110 | 38796.4 |
| sulfite exporter taue/safe family protein | CPT03_RS07680 | Not Available | Negative | 1866436 - 1867374 | 33844.4 |
| mate family efflux transporter | CPT03_RS07685 | Not Available | Negative | 1867457 - 1868824 | 49488.1 |
| helix-turn-helix domain-containing protein | CPT03_RS07690 | Not Available | Negative | 1868859 - 1869482 | 23595.4 |
| duf4442 domain-containing protein | CPT03_RS07695 | Not Available | Negative | 1869513 - 1869998 | 18443.5 |
| phosphoribosylpyrophosphate synthetase | CPT03_RS07700 | Not Available | Positive | 1870078 - 1870383 | 11560.6 |
| fasciclin domain-containing protein | CPT03_RS07705 | Not Available | Positive | 1870456 - 1871052 | 20645.9 |
| coproporphyrinogen iii oxidase | CPT03_RS07710 | Not Available | Positive | 1871194 - 1871388 | 6629.95 |
| mfs transporter | CPT03_RS07715 | Not Available | Positive | 1871528 - 1872748 | 44519.7 |
| oxygen-dependent coproporphyrinogen oxidase | CPT03_RS07720 | Not Available | Positive | 1872831 - 1873727 | 34663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

