Pedobacter ginsengisoli strain T01R-27

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter ginsengisoli strain T01R-27 is a bacterial strain characterized by the presence of flagella, which suggests motility capabilities that may enhance its ecological adaptability. This strain contains a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and gene expression. The genomic information for Pedobacter ginsengisoli T01R-27 is accessible under the accession number NZ_CP024091.1, providing a valuable resource for further study and characterization. The presence of flagella in Pedobacter ginsengisoli T01R-27 may play a significant role in its ecological interactions, allowing for movement towards favorable environments or away from adverse conditions. This motility can be crucial for survival in diverse habitats, especially in soil environments where nutrient availability can fluctuate. Overall, understanding the traits of Pedobacter ginsengisoli strain T01R-27, particularly its motility and genetic structure, can provide insights into its ecological roles and potential applications in biotechnology or environmental microbiology. Further research into this strain could reveal its interactions within microbial communities and its contributions to soil health and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter ginsengisoli
Strainstrain T01R-27

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter ginsengisoli strain T01R-27 chromosome, complete

Gene Summary

Adenine Count

1674046 bp

Thymine Count

1667241 bp

Guanine Count

1014742 bp

Cytosine Count

1017331 bp

Genome Length

5373360 bp

Protein-coding Genes

4490 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-glycero-alpha-d-manno-heptose-1,7- bisphosphate 7-phosphataseCPT03_RS07620Not AvailablePositive1853088 - 185362119804.8
fructose-6-phosphate aldolaseCPT03_RS07625Not AvailableNegative1853688 - 185435023387.4
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive1854490 - 1854589Not Available
glutamate synthase large subunitCPT03_RS07640Not AvailablePositive1855042 - 1859553165967.0
glutamate synthase subunit betaCPT03_RS07645Not AvailablePositive1859557 - 186102353686.4
hypothetical proteinCPT03_RS07650Not AvailableNegative1861099 - 186170422841.7
metallophosphoesterase family proteinCPT03_RS07655Not AvailableNegative1861685 - 186247929739.4
ydei/ompd-associated family proteinCPT03_RS07660Not AvailableNegative1862520 - 186315223831.1
rna methyltransferaseCPT03_RS07665Not AvailableNegative1863197 - 186372719629.8
galactokinaseCPT03_RS07670Not AvailableNegative1863767 - 186491842684.0

Displaying genes 1531 – 1540 of 4562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.