Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | CPT03_RS07570 | Not Available | Negative | 1846672 - 1847355 | 25307.7 |
| hypothetical protein | CPT03_RS07575 | Not Available | Negative | 1847368 - 1847640 | 10694.8 |
| rna polymerase sigma factor | CPT03_RS07580 | Not Available | Negative | 1847621 - 1848148 | 20190.2 |
| hypothetical protein | CPT03_RS07585 | Not Available | Negative | 1848238 - 1848972 | 27898.7 |
| hypothetical protein | CPT03_RS07590 | Not Available | Negative | 1849010 - 1849192 | 6851.06 |
| dknyy domain-containing protein | CPT03_RS07595 | Not Available | Negative | 1849307 - 1850272 | 37589.6 |
| hypothetical protein | CPT03_RS07600 | Not Available | Positive | 1850465 - 1851412 | 36487.7 |
| hypothetical protein | CPT03_RS07605 | Not Available | Positive | 1851449 - 1851688 | 9150.66 |
| Trna-lys | Not Available | Not Available | Positive | 1851803 - 1851875 | Not Available |
| alpha/beta fold hydrolase | CPT03_RS07615 | Not Available | Negative | 1852098 - 1852925 | 30649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

