Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CPT03_RS07520 | Not Available | Negative | 1835839 - 1836576 | 27486.1 |
| abc transporter atp-binding protein | CPT03_RS07525 | Not Available | Negative | 1836579 - 1837499 | 34746.5 |
| hlyd family secretion protein | CPT03_RS07530 | Not Available | Negative | 1837496 - 1838398 | 32840.9 |
| tolc family protein | CPT03_RS07535 | Not Available | Negative | 1838417 - 1839679 | 47639.6 |
| tetr/acrr family transcriptional regulator | CPT03_RS07540 | Not Available | Negative | 1839732 - 1840349 | 23447.0 |
| sulp family inorganic anion transporter | CPT03_RS07545 | Not Available | Positive | 1840514 - 1842046 | 55005.8 |
| gdsl-type esterase/lipase family protein | CPT03_RS07550 | Not Available | Positive | 1842084 - 1842869 | 28885.7 |
| mechanosensitive ion channel family protein | CPT03_RS07555 | Not Available | Positive | 1842952 - 1845420 | 92589.1 |
| ester cyclase | CPT03_RS07560 | Not Available | Positive | 1845505 - 1846101 | 22109.8 |
| nad(+)--rifampin adp-ribosyltransferase | CPT03_RS07565 | Not Available | Positive | 1846136 - 1846573 | 16143.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

