Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | CPT03_RS07470 | Not Available | Negative | 1826027 - 1826587 | 20838.8 |
| duf488 domain-containing protein | CPT03_RS07475 | Not Available | Negative | 1826658 - 1827008 | 13779.7 |
| fad-binding oxidoreductase | CPT03_RS07480 | Not Available | Positive | 1827077 - 1827763 | 25410.5 |
| na+/h+ antiporter | CPT03_RS07485 | Not Available | Negative | 1827769 - 1829373 | 60294.1 |
| gfo/idh/moca family protein | CPT03_RS07490 | Not Available | Positive | 1829516 - 1830901 | 51057.1 |
| duf6515 family protein | CPT03_RS07495 | Not Available | Positive | 1831025 - 1831843 | 29992.0 |
| o-methyltransferase | CPT03_RS07500 | Not Available | Negative | 1831913 - 1832497 | 21919.3 |
| duf1080 domain-containing protein | CPT03_RS07505 | Not Available | Positive | 1832633 - 1833607 | 35313.2 |
| abc transporter permease | CPT03_RS07510 | Not Available | Negative | 1833613 - 1834731 | 42062.8 |
| abc transporter permease | CPT03_RS07515 | Not Available | Negative | 1834728 - 1835873 | 42462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

