Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4255 domain-containing protein | CPT03_RS07375 | Not Available | Positive | 1797522 - 1798133 | 23000.4 |
| hypothetical protein | CPT03_RS07380 | Not Available | Positive | 1798156 - 1799196 | 38176.3 |
| phage tail sheath family protein | CPT03_RS07385 | Not Available | Positive | 1799213 - 1800784 | 57269.3 |
| phage tail protein | CPT03_RS07390 | Not Available | Positive | 1800822 - 1801256 | 16327.5 |
| phage tail protein | CPT03_RS07395 | Not Available | Positive | 1801268 - 1801813 | 20022.1 |
| duf5908 family protein | CPT03_RS22900 | Not Available | Positive | 1801817 - 1801981 | 5914.14 |
| cis tube protein | CPT03_RS07400 | Not Available | Positive | 1801984 - 1802700 | 26984.4 |
| type vi secretion system tip protein vgrg | CPT03_RS07405 | Not Available | Positive | 1802708 - 1804585 | 68251.5 |
| hypothetical protein | CPT03_RS07410 | Not Available | Positive | 1804588 - 1804839 | 9014.88 |
| gpw/gp25 family protein | CPT03_RS07415 | Not Available | Positive | 1804865 - 1805296 | 16387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

