Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | CPT03_RS07325 | Not Available | Positive | 1787051 - 1787725 | 25267.0 |
| dna ligase d | CPT03_RS07330 | Not Available | Positive | 1787743 - 1790277 | 96287.2 |
| duf6686 family protein | CPT03_RS07335 | Not Available | Positive | 1790382 - 1790708 | 12357.8 |
| ku protein | CPT03_RS07340 | Not Available | Positive | 1790770 - 1791540 | 29447.6 |
| chrd domain-containing protein | CPT03_RS07345 | Not Available | Positive | 1791751 - 1792296 | 18807.1 |
| hypothetical protein | CPT03_RS07350 | Not Available | Negative | 1792349 - 1792708 | 14242.0 |
| upxy family transcription antiterminator | CPT03_RS07355 | Not Available | Positive | 1793190 - 1793708 | 19847.1 |
| glycosyltransferase | CPT03_RS07360 | Not Available | Positive | 1793895 - 1796078 | 84112.2 |
| capsular polysaccharide synthesis protein | CPT03_RS07365 | Not Available | Positive | 1796094 - 1796843 | 28621.1 |
| fkbm family methyltransferase | CPT03_RS07370 | Not Available | Positive | 1796853 - 1797503 | 24795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

