Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CPT03_RS07270 | Not Available | Positive | 1772760 - 1775132 | 88059.8 |
| duf1553 domain-containing protein | CPT03_RS07275 | Not Available | Positive | 1775259 - 1778492 | 122418.0 |
| duf1501 domain-containing protein | CPT03_RS07280 | Not Available | Positive | 1778497 - 1780017 | 56568.3 |
| c-type cytochrome domain-containing protein | CPT03_RS07285 | Not Available | Positive | 1780014 - 1781351 | 49171.6 |
| arac family transcriptional regulator | CPT03_RS07290 | Not Available | Positive | 1781425 - 1782306 | 33869.9 |
| sulfatase family protein | CPT03_RS07295 | Not Available | Positive | 1782330 - 1783838 | 55006.1 |
| hypothetical protein | CPT03_RS07300 | Not Available | Positive | 1783943 - 1784431 | 19246.9 |
| bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferase | CPT03_RS07305 | Not Available | Positive | 1784589 - 1785545 | 36114.3 |
| cupin domain-containing protein | CPT03_RS07310 | Not Available | Positive | 1785557 - 1785880 | 12065.5 |
| hypothetical protein | CPT03_RS07315 | Not Available | Positive | 1785912 - 1786019 | 4101.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

