Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CPT03_RS07220 | Not Available | Positive | 1763730 - 1764632 | 35124.7 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS07225 | Not Available | Positive | 1764715 - 1765554 | 30206.2 |
| hypothetical protein | CPT03_RS07230 | Not Available | Negative | 1765555 - 1765788 | 8554.69 |
| hydrolase | CPT03_RS07235 | Not Available | Negative | 1766011 - 1766652 | 23579.6 |
| mepb family protein | CPT03_RS23360 | Not Available | Positive | 1766910 - 1767047 | 5439.55 |
| class i sam-dependent methyltransferase | CPT03_RS07245 | Not Available | Positive | 1767095 - 1767742 | 24177.4 |
| acetylserotonin o-methyltransferase | CPT03_RS07250 | Not Available | Positive | 1767779 - 1768861 | 40219.6 |
| hypothetical protein | CPT03_RS07255 | Not Available | Positive | 1768974 - 1771331 | 88518.5 |
| hypothetical protein | CPT03_RS07260 | Not Available | Negative | 1771451 - 1771975 | 20193.5 |
| srpbcc family protein | CPT03_RS07265 | Not Available | Negative | 1771994 - 1772437 | 16555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

