Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | CPT03_RS07120 | Not Available | Positive | 1738766 - 1740016 | 45530.9 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS07125 | Not Available | Positive | 1740428 - 1743751 | 122229.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS07130 | Not Available | Positive | 1743769 - 1745217 | 54298.7 |
| alpha/beta hydrolase family protein | CPT03_RS07135 | Not Available | Positive | 1745243 - 1747717 | 94322.8 |
| sugar-binding domain-containing protein | CPT03_RS07140 | Not Available | Positive | 1747814 - 1750435 | 99771.1 |
| maue/doxx family redox-associated membrane protein | CPT03_RS07145 | Not Available | Positive | 1750500 - 1750973 | 18003.0 |
| hypothetical protein | CPT03_RS07150 | Not Available | Positive | 1750997 - 1751263 | 9971.14 |
| hypothetical protein | CPT03_RS07155 | Not Available | Positive | 1751308 - 1752348 | 39390.3 |
| m16 family metallopeptidase | CPT03_RS07160 | Not Available | Positive | 1752369 - 1755206 | 106050.0 |
| thioredoxin family protein | CPT03_RS07165 | Not Available | Positive | 1755224 - 1756282 | 39826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

