Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | CPT03_RS07070 | Not Available | Negative | 1730969 - 1731883 | 34640.4 |
| hypothetical protein | CPT03_RS22770 | Not Available | Positive | 1732076 - 1732216 | 5216.35 |
| hypothetical protein | CPT03_RS07075 | Not Available | Positive | 1732287 - 1733672 | 54103.3 |
| hypothetical protein | CPT03_RS07080 | Not Available | Negative | 1733667 - 1734725 | 40704.9 |
| res family nad+ phosphorylase | CPT03_RS07085 | Not Available | Positive | 1734809 - 1735819 | 37771.3 |
| hypothetical protein | CPT03_RS07090 | Not Available | Negative | 1735846 - 1736391 | 21306.3 |
| hypothetical protein | CPT03_RS07095 | Not Available | Negative | 1736416 - 1736688 | 10275.5 |
| hypothetical protein | CPT03_RS07105 | Not Available | Negative | 1737118 - 1737453 | 12565.0 |
| hypothetical protein | CPT03_RS07110 | Not Available | Positive | 1737792 - 1738025 | 8611.54 |
| rna polymerase sigma-70 factor | CPT03_RS07115 | Not Available | Positive | 1738110 - 1738697 | 22506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

