Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | CPT03_RS07020 | Not Available | Negative | 1721438 - 1722619 | 44599.9 |
| sir2 family protein | CPT03_RS07025 | Not Available | Negative | 1722723 - 1723634 | 35392.4 |
| plasmid mobilization protein | CPT03_RS07030 | Not Available | Negative | 1723804 - 1724214 | 15967.0 |
| abortive infection system antitoxin abigi family protein | CPT03_RS07035 | Not Available | Negative | 1724512 - 1725456 | 36487.6 |
| hypothetical protein | CPT03_RS07040 | Not Available | Negative | 1725638 - 1725850 | 8204.09 |
| hypothetical protein | CPT03_RS07045 | Not Available | Positive | 1725979 - 1726884 | 34935.7 |
| res family nad+ phosphorylase | CPT03_RS07050 | Not Available | Negative | 1726906 - 1727946 | 40040.6 |
| sce7725 family protein | CPT03_RS07055 | Not Available | Negative | 1727989 - 1728927 | 35399.5 |
| sce7726 family protein | CPT03_RS07060 | Not Available | Negative | 1728936 - 1729820 | 34003.5 |
| hypothetical protein | CPT03_RS07065 | Not Available | Negative | 1729962 - 1730831 | 33569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

