Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS06820 | Not Available | Negative | 1670481 - 1672169 | 62633.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS06825 | Not Available | Negative | 1672201 - 1675509 | 120255.0 |
| rok family protein | CPT03_RS06830 | Not Available | Negative | 1675606 - 1676793 | 43252.7 |
| asma-like c-terminal region-containing protein | CPT03_RS06835 | Not Available | Positive | 1677111 - 1679540 | 89975.9 |
| osmc family protein | CPT03_RS06840 | Not Available | Positive | 1679572 - 1679982 | 14411.0 |
| glutamate 5-kinase | CPT03_RS06845 | Not Available | Positive | 1680125 - 1681159 | 36653.3 |
| glutamate-5-semialdehyde dehydrogenase | CPT03_RS06850 | Not Available | Positive | 1681167 - 1682414 | 46175.6 |
| laci family dna-binding transcriptional regulator | CPT03_RS06855 | Not Available | Positive | 1682411 - 1683427 | 38128.0 |
| phospho-sugar mutase | CPT03_RS06860 | Not Available | Negative | 1683439 - 1685172 | 63657.9 |
| aspartate kinase | CPT03_RS06865 | Not Available | Positive | 1685441 - 1686754 | 48634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

