Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| liaf transmembrane domain-containing protein | CPT03_RS06770 | Not Available | Positive | 1657408 - 1657764 | 13542.1 |
| tim-barrel domain-containing protein | CPT03_RS06775 | Not Available | Negative | 1657824 - 1660964 | 118141.0 |
| signal peptidase ii | CPT03_RS06780 | Not Available | Positive | 1661149 - 1661652 | 18561.3 |
| marr family winged helix-turn-helix transcriptional regulator | CPT03_RS06785 | Not Available | Negative | 1661656 - 1662138 | 18651.0 |
| gnat family n-acetyltransferase | CPT03_RS06790 | Not Available | Negative | 1662149 - 1662655 | 19172.3 |
| srpbcc family protein | CPT03_RS06795 | Not Available | Negative | 1662751 - 1663245 | 19046.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | CPT03_RS06800 | Not Available | Negative | 1663321 - 1664694 | 50280.8 |
| malate:quinone oxidoreductase | CPT03_RS06805 | Not Available | Positive | 1664990 - 1666489 | 55148.5 |
| alpha/beta hydrolase-fold protein | CPT03_RS06810 | Not Available | Positive | 1666616 - 1669054 | 90466.6 |
| cytochrome c | CPT03_RS06815 | Not Available | Negative | 1669065 - 1670396 | 50407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

