Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5107 domain-containing protein | CPT03_RS06720 | Not Available | Positive | 1645244 - 1648585 | 128777.0 |
| alpha-galactosidase | CPT03_RS06725 | Not Available | Positive | 1648605 - 1650815 | 83546.2 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | CPT03_RS06730 | Not Available | Positive | 1650832 - 1651887 | 40350.8 |
| hypothetical protein | CPT03_RS06735 | Not Available | Positive | 1651956 - 1652144 | 7069.29 |
| rna polymerase sigma factor | CPT03_RS06740 | Not Available | Positive | 1652270 - 1652797 | 20577.7 |
| hypothetical protein | CPT03_RS06745 | Not Available | Negative | 1652801 - 1653040 | 9063.7 |
| hypothetical protein | CPT03_RS06750 | Not Available | Negative | 1653056 - 1653688 | 23512.5 |
| cyclopropane fatty acyl phospholipid synthase | CPT03_RS06755 | Not Available | Positive | 1653819 - 1654934 | 43543.3 |
| superoxide dismutase family protein | CPT03_RS06760 | Not Available | Negative | 1654978 - 1655505 | 18861.2 |
| m1 family metallopeptidase | CPT03_RS06765 | Not Available | Positive | 1655689 - 1657275 | 60568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

